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PK concentration-time plot code

Usage

tfl_fig_pk(
  adam = NULL,
  style = c("mean", "mean_log", "individual"),
  param = NULL,
  data = "ADPC",
  value = "AVAL",
  time = "NFRLT",
  time_label = "Nominal time (h)",
  group = "TRT01A",
  pop = "SAFFL",
  where = NULL,
  legend = "inside",
  palette = "treatment",
  key = "USUBJID",
  theme = "boxed",
  title = NULL,
  width = 7.5,
  height = 4.5,
  dpi = 300,
  units = "in",
  file = NULL,
  plot_id = "pk"
)

Arguments

adam

Optional ADaM data (tfl_read_adam()); values found in the data (groups, colours) are written literally into the code.

style

mean (mean +/- SD by nominal time and group, linear axis), mean_log (the same on a log axis) or individual (one line per subject, log axis, one panel per group).

param

PARAMCD of the time-to-event parameter.

data

Dataset name.

value

Analysis variable (AVAL, CHG, PCHG, ...).

time

Nominal time variable.

time_label

Axis label of time.

group

Treatment variable; its first value is the reference.

pop

Population flag (== "Y"); NULL for none.

where

Extra record condition as R code, e.g. 'AVISIT != "Retrieval"'; NULL for none.

legend

Legend preset (none, right, bottom, top, inside, ...).

palette

Palette preset of the group (rate_ci, dodged) or of the category (stacked, default response).

key

Subject key used to join ADSL.

theme

Theme preset.

title

Figure title.

width, height, dpi, units

Figure size.

file

Write the script to this file.

plot_id

Used in the output file name.

Value

A tfl_code object: the figure's 'ggplot2' script, a character vector of class tfl_code with its specification in attribute spec; printing it shows the script.