PK concentration-time plot code
Usage
tfl_fig_pk(
adam = NULL,
style = c("mean", "mean_log", "individual"),
param = NULL,
data = "ADPC",
value = "AVAL",
time = "NFRLT",
time_label = "Nominal time (h)",
group = "TRT01A",
pop = "SAFFL",
where = NULL,
legend = "inside",
palette = "treatment",
key = "USUBJID",
theme = "boxed",
title = NULL,
width = 7.5,
height = 4.5,
dpi = 300,
units = "in",
file = NULL,
plot_id = "pk"
)Arguments
- adam
Optional ADaM data (
tfl_read_adam()); values found in the data (groups, colours) are written literally into the code.- style
mean(mean +/- SD by nominal time and group, linear axis),mean_log(the same on a log axis) orindividual(one line per subject, log axis, one panel per group).- param
PARAMCD of the time-to-event parameter.
- data
Dataset name.
- value
Analysis variable (
AVAL,CHG,PCHG, ...).- time
Nominal time variable.
- time_label
Axis label of
time.- group
Treatment variable; its first value is the reference.
- pop
Population flag (
== "Y");NULLfor none.- where
Extra record condition as R code, e.g.
'AVISIT != "Retrieval"';NULLfor none.- legend
Legend preset (
none,right,bottom,top,inside, ...).- palette
Palette preset of the group (
rate_ci,dodged) or of the category (stacked, defaultresponse).- key
Subject key used to join ADSL.
- theme
Theme preset.
- title
Figure title.
- width, height, dpi, units
Figure size.
- file
Write the script to this file.
- plot_id
Used in the output file name.