eDISH plot code — tfl_fig

Maximum post-baseline transaminase vs total bilirubin, both as multiples of the upper limit of normal, with the Hy's law reference lines.

Usage

tfl_fig_edish(
  adam = NULL,
  style = c("alt", "alt_ast"),
  data = "ADLB",
  alt = "ALT",
  ast = "AST",
  bili = "BILI",
  uln = "ANRHI",
  post_baseline = "AVISITN > 0",
  group = "TRT01A",
  pop = "SAFFL",
  where = NULL,
  legend = "inside",
  palette = "treatment",
  key = "USUBJID",
  theme = "boxed",
  title = NULL,
  width = 7,
  height = 6,
  dpi = 300,
  units = "in",
  file = NULL,
  plot_id = "edish"
)

Arguments

adam: Optional ADaM data (tfl_read_adam()); values found in the data (groups, colours) are written literally into the code.
style: alt (ALT on the x axis) or alt_ast (the larger of ALT and AST).
data: Dataset name.
alt, ast, bili: PARAMCD of ALT, AST and total bilirubin.
uln: Upper limit of normal variable.
post_baseline: Condition selecting post-baseline records (R code).
group: Treatment variable; its first value is the reference.
pop: Population flag (== "Y"); NULL for none.
where: Extra record condition as R code, e.g. 'AVISIT != "Retrieval"'; NULL for none.
legend: Legend preset (none, right, bottom, top, inside, ...).
palette: Palette preset of the group (rate_ci, dodged) or of the category (stacked, default response).
key: Subject key used to join ADSL.
theme: Theme preset.
title: Figure title.
width, height, dpi, units: Figure size.
file: Write the script to this file.
plot_id: Used in the output file name.

Value

A tfl_code object: the figure's 'ggplot2' script, a character vector of class tfl_code with its specification in attribute spec; printing it shows the script.